r00bit

Thanks for your explanation, yeah maybe do some filtering to exclude some spectrum within a 0.1 Da then call CosineGreddy. Is there any configuration to set to find similarity between...

Here is the code I used to calculate the similarity score for two files containing 5 spectra (just for test): def calculate_similarity_spec2vec (ref_file, query_file, model_file): # Load reference spectrums ref_spectrums...

I learned this issue happened because there is low similarity between spectra so the missing_percentage is bigger than allowed_missing_percentage in _check_model_coverage function. For example, for the files that I tested...

I downloaded the code from github, where can I get the last version? thanks!

Hello, the de novo algorithm works pretty well on the model.h5 released by you using the following command. python denovo.py --input example.mgf --model model.h5 --output example_prediction.tsv However, when I trained...