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                                            ptk1601

Help with bc_transform_func for GEX job in Snakemake

I've fixed this issue just by changing the format of the cell_names part of the cistopic_obj, but I am now getting this error. Is there anything I can do to...

Help with bc_transform_func for GEX job in Snakemake

> Have you considered formatting the cell_names(indices) in your GEX object instead of the cistopic_obj? > > **NOTE:** I am not a part of the scenic+ team; I am just...

pycisTopic find_diff_features function stopping abruptly at Starting a local Ray instance

Hi! I actually managed to figure this one out, turns out there was a discrepancy between barcode names that was causing this issue!