Tan Phan

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Just an update on this. Now I can reproduce your result in Fig3 for sample Lung13. My issue was that I tried to use the `coef` vector of each cell...

The values might be in log scale. Did you try to exponential the values before import those to Seurat?

Hi @royfrancis , at the moment controlling for covariates is not supported.

I just fixed it in #55 , can you re-install the master and check it again?