pshukla63

Seurat Object not closing when using SaveH5Seurat

1

Hello, I am trying to save my Seurat object and am getting this error: ``` Error in H5_close_any(self$id) : HDF5-API Errors: error #000: ../../../src/H5F.c in H5Fclose(): line 595: closing file...

Seurat Custom Functions

1

Hello, I want to run clusterExperiment using a custom function. I was wondering if it would be possible to run the Seurat Functions used for clustering? Maybe something like this:...

Hello, I was wondering how to find out the top genes driving the dynamic RNA velocity? Something like rank_velocity_genes from scVelo. Thank you !