Russ Poldrack

Results 37 issues of Russ Poldrack

Using the following command on Mac OS 10.15.7 with Docker version 20.10.6: ``` docker run --rm repronim/neurodocker:0.7.0 generate docker \ --base debian:stretch --pkg-manager apt --fsl version=6.0.3 ``` I get the...

Currently, in order to compare the rates of change between countries one has to eyeball them. It could be useful to provide a measure such as doubling time (in days)...

it's not clear to a non-expert user what to do with the time window slider. maybe add some text to say what it does? or a popup?

a non-expert who reviewed the site found that the map was somewhat unwiedly and not really necessary. the list of countries is a much better way to actually find a...

**Describe the bug** It is sometimes necessary to set an output directory for ants transforms other than `/tmp` due to space limitations. However, the `outprefix` option does not seem to...

**Describe the bug** Wildcard imports are widely agreed upon as a no-no in Python (see e.g. [here](https://docs.quantifiedcode.com/python-anti-patterns/maintainability/from_module_import_all_used.html?highlight=wildcard) or [here](https://internetworking.dev/why-it-is-bad-idea-to-use-wildcard-based-imports/)). They are particularly bad when placed inside an __init__.py file because...

**Describe the bug** `ants.motion_correction()` fails intermittently (over timepoints) on 2-photon imaging data with micron resolution when the resolution is correctly specified (either in microns or in millimeters). It works properly...

the sub-{subject}_scans.tsv includes full acquisition times including date, which are considered PHI. can these be removed?

Based on a discussion with @Lestropie et al at the BIDS connectivity meeting: Currently the common derivatives standard describes a distinction between "discrete" and "probabilistic" parcellations. However, there will be...

enhancement
discussion

the current testing strategy has unwanted dependencies between tests. should rewrite using a strategy that decouples the individual tests