pengouy

> Clearing the local cache of `AnnotationHub` may work: > > ```r > ah AnnotationHub::removeCache(ah) > ``` Finally!!! Thank you so much! I have tried so many times before...

Thank you so much for the quick response, it helps a lot. I will try the hecatombDev. Many thanks for the effort.

> All good, let me know how it goes. Hi, the job has not finished yet with the newly released version 1.3.1, but it works well untill now. I'm using...

Thanks for the explaination, I have noticed that Hecatomb would select itself to run multiple jobs. I checked the result file "**_contigAnnotations.tsv_**" and found that there was an error during...

Hi, sorry to bother you again that the job ended just now without no error report, but yeilded a "**_bigtable.tsv_**" sized only 1Kb, I checked the log directory and found...

Here is the relative log detail: ``` [Tue Feb 6 18:56:40 2024] rule combine_aa_nt: input: hecatomb.out/processing/mmseqs_aa_secondary/AA_bigtable.tsv, hecatomb.out/processing/mmseqs_nt_secondary/NT_bigtable.tsv output: hecatomb.out/results/bigtable.tsv log: hecatomb.out/logs/combine_AA_NT.log jobid: 77 benchmark: hecatomb.out/benchmarks/combine_AA_NT.txt reason: Missing output files: hecatomb.out/results/bigtable.tsv;...

And when I load the "**_contigSeqTable.tsv_**" file, I found all classification of contigs into taxon levels remains _NA_.

Oh no! I have deleted the whole `hecatomb.out` directory yesterday, but I am sure `hecatomb.out/results/bigtable.tsv` is tiny file

Appreciate your efforts, looking forward to it.

Hi, I am a little bit confused about the result of the file `merged_assembly.fasta`, the NCBI BLAST results of contigs in this file do not always match the taxon classification...