parkerstevenson

Hi all, I'm still encountering this issue using squidpy.read.vizgen(), the obs from the AnnData object are only filled with NaN after changing line 164 of the squidpy.read.vizgen() function from `coords.set_index(coords.index.astype("str"),...

I removed the genes with zero expression across the board, and the cells were pre-filtered by my collaborator so there shouldn't be zero variance/expression there either. Get Outlook for iOS...