palomo11

run does not finish

1

Hi, I'm running simka on around 1000 samples with a total of 45 billion reads. ``` simka -in simka_input.txt -out results_simka -out-tmp temp_output -simple-dist -max-count 6 -max-merge 18 -nb-cores 112...

Build own database: <genome_id>.genes

8

Hi, I would like to use MIDAS with my own genomes as they are not present in the reference database. I'm able to get all the required input files but...

--cov_corr value

1

Hi, I'm using RefineM with my genomes and 24 samples. In the readme, it is suggested that: "If you have more than 6 data point (i.e. BAM files) comprising your...