snpr
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openSNP
The sources of the openSNP website
### Relevant Resources * https://circleci.com/docs/2.0/config-intro/ * https://circleci.com/developer/orbs/orb/circleci/ruby
This was discovered when I wanted to download the genotyping files of all ppl that have entered the peanut butter preference (c.f. https://twitter.com/gedankenstuecke/status/943205612837486592). You can easily get all users that...
Paperclip is deprecated and Rails has it's own built-in solution, now. Let's use it!
So far the phenotypes and the SNPs are rather independent from each other, making it hard to link one to the other. But in principle we already have the information...
Right now the preparsing job uses the `zip` gem to unzip uploaded files, but uploaded files can come in a variety of flavours. FTDNA just updated their file format to...
- [x] use bash tools to check file type - [x] use the right gem to extract from the archive - [ ] make sure everything downstream still works, needs...
https://opensnp.org/statistics the graphs seem to be ending a year ago? Or maybe they're actually up-to-date and the X axis labels are off.
A list of URLs for user's genotype files would be helpful for Open Humans integration.
A user asked for this feature via email and gave some examples which are already in our database but haven't been processed due to a different format I guess? The...
What do we do? Delete the Genotype record and notify the user? https://sentry.io/opensnp/opensnp/issues/436275621/ ``` Errno::ENOENT: No such file or directory @ rb_file_s_lstat - /home/app/snpr/public/data/4979.genes-for-good.3516 app/workers/zipgenotypingfiles.rb:27:in `block (2 levels) in perform'...