Omar Zade Kana, PhD

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icon company Allen Institute icon location Seattle, Washington icon location Computational biologist interested in what defines cell types, and creating models of spatial transcriptomics.

Results 2 comments of Omar Zade Kana, PhD

Negative KL loss

I am also getting negative loss. I do not know why this is the case at low dimensions.

Selecting specific stains when reading merscope files into a sdata object.

Sorry for the late response @LucaMarconato. Yes, I could definitely get a small PR done for this. I already have a small fix that allows you to include it as...