Oscar

Thank you for the reply. Looking forward to it. Any tentative date? :-)

Hi! we may have some data available. Maybe you can contact me privately and give me some details on what you would need. Cheers, Oscar

Hi James, thanks for your quick response. Apparently I have issues with my python version and the packages versions. I'm working on an HPC and I need to load either...

I have dealt with some the packages, but for instance this is creting some trouble: ``` python3 deeplexicon.py -p /fast5_pass/ -f multi -m models/pAmps-final-actrun_newdata_nanopore_UResNet20v2_model.030.h5 > output.tsv Traceback (most recent call...

James, thank you so much for helping me out with this. I will work with an environment. I am not able to install the pluging from the source code. Apparently...

Done. We have the udocker: udocker/1.1.3-python-2.7.15 module available but I have never used it before. Now, the problem comes from h5py (even though I installed it): ``` pip install h5py...

Hi James, the IT team helped installing the program in a conda environment. Then we are having this error now: python3 deeplexicon.py -p /fast5_pass/ -f multi -m models/pAmps-final-actrun_newdata_nanopore_UResNet20v2_model.030.h5 > output.tsv...

Hi James, I got a new issue: ``` python3 deeplexicon.py -p /mnt/lustre/scratch/nlsas/home/csic/mgr/ogr/SarsCov2/directRNA/test1/20220323_1439_X1_FAS46772_0b6ed64a/fast5_pass/ -f multi -m models/pAmps-final-actrun_newdata_nanopore_UResNet20v2_model.030.h5 > output.tsv Using TensorFlow backend. WARNING:tensorflow:From /mnt/netapp1/Store_CSIC/home/csic/mgr/ogr/.conda/envs/deeplexicon/lib/python3.7/site-packages/tensorflow/python/framework/op_def_library.py:263: colocate_with (from tensorflow.python.framework.ops) is deprecated and will...