nuin
I think this project is indeed dead. It's publish and kill it effect.
I was able to build on macOS using `nimble`, the only issue is that I see ``` [mosdepth] WARNING: built in debug mode; will be slow ``` and it would...
I have `Nim Compiler Version 1.2.4 [MacOSX: amd64]` and `nimble v0.11.4 compiled at 2020-06-28 06:12:35`
@brentp I did the `nimble install` and it still gave me a debug version. I will try the direct nim compilation
It works fine too with an incredible speedup Using debug version `mosdepth -t 16 --by /opt/BED/Inherited_Cancer_panel_FINAL.bed test 138.59s user 2.85s system 110% cpu 2:07.53 total` Using release `~/src/mosdepth/mosdepth -t 16...
Just did a fresh install of Conda on my machine and set the Bioconda channel, got this ``` ❯ conda install mosdepth Collecting package metadata (current_repodata.json): done Solving environment: failed...
PCRE is still listed on the Readme.md on the main page `mosdepth also requires a recent version of PCRE, and will give the error could not import: pcre_free_study if the...
@brentp Just saw this issue, coming from a sliver issue, and yes, I do lots of genomic processing in Macs.
I think this solves most of our issues. The main problem for us is that some old templates are owned by people that don’t admin the site anymore. Having a...
Here is your error `configure: error: zlib development files not found` install `zlib-devel` using your Linux package manager and try again.