Ekaterina Noskova

Results 5 issues of Ekaterina Noskova

moments was updated and now some tests fail. For example, fsc file is read and mask is now different. Should check that and update tests.

bug

For momentsLD sequence length should be set as dictionary with length for each chromosome. There is not enough documentation about it (Issue #56). We need to add it.

enhancement

GADMA reads custom models for different engines. For example, one could take model specified for dadi and ask GADMA to find its parameters. GADMA has its own interface for model...

enhancement

There are a plenty of papers that should be cited when one is using GADMA. They can be found in the documentation but it will be more useful to put...

enhancement

Sometimes `gadma.optimize_ga` is using the following way: ``` popt = gadma.Inference.optimize_ga( data, func_ex, engine='dadi', args=pts, p_ids = p_ids, X_init= [p0], lower_bound=lower_bound, upper_bound=upper_bound, verbose=1) ``` In that case there is an...

enhancement