nirvana693

hi @bernatgel, Thank you for the quick response. **Approach1:** As shown in my 1st post, when I draw chromosome wise (telomere_plot.R), results are as expected. **Approach2:** I removed `chromosomes` option...

Hi @bernatgel Thank you. Is there a way to adjust to chromosome wise scale when granger object (using import function) used?

@bernatgel Approach 3 works perfectly if I add the `kpDataBackground` outside the loop instead of using it in `for` loop as I did before. not sure why few chromosomes are...

Everything is mapped. The data was mapped using pbmm2 (internally uses minimap2). These are hifiasm assembled contigs which I am using as pseudo reads. ``` 21249 + 0 in total...