neptuneyt

Results 15 issues of neptuneyt

Dear ete3 team, Thanks for your such amazing work. My issue is that, Suppose I have a newick file A, and a list of old and new names mapping table...

Dear megahit team, Thanks for your so excellent work first of all. I have 200 Illumina paired-end 150 bp metagenomic sequence samples. I used megahit to assemble each sample very...

cd-hit version:4.8.1 command: cd-hit-est -i Megahit/STA-004A/final.contigs.fa -o CD_Hit/STA-004A_c95 -c 0.95 -n 10 -d 0 -T 8 &>CD_Hit/STA-004A.log & The input contigs file size 404M,it raisen the "Segmentation fault" ,how can...

Hi,Jessie Thanks for your VirFinder job! when I test with my single sequence follow your github instruction,it return ```r Error in smooth.spline(lambda, pi0, df = smooth.df) : missing or infinite...

Dear empress team, Thanks for your hard work with empress. My issue is how to show tip lable name on the tree plot, just like: ![image](https://user-images.githubusercontent.com/39893798/111929830-74217300-8af2-11eb-86d1-1cdf636a2193.png) Thanks a lot!

feature request

Dear OrthoFinder, Thanks for your such amazing work. There are multiple protein sequences under each OG, how do I determine the final protein function of each OG. Two ideas, first,...

# The effect of non-prokaryotes sequence Dear checkM team, thanks a lot for developing such a wonderful software. Here I have a question, checkm identifies contamination and integrity based on...

Dear quickmerge teams, I have installed the latest quickmerge which could support mumer 4,but I was confused by the argument ```-l``` and ```-ml```, according the manual, >-l LENGTH_CUTOFF, --length_cutoff LENGTH_CUTOFF,which...

Dear pavian teams, Thanks for your amazing work. When I used pavian via web interface, I found there is not an option for **output pdf** results. If adding an pdf...

enhancement

Dear developer, I'm curious if ezaai is also suitable for AAI calculations between eukaryotic proteins, please note that proteins and not genomes are entered here. Looking forward your reply. Thanks...