Nate Olson

wrappers for hap.py and dipcall

11

**Is your feature request related to a problem? Please describe.** Difficulty developing an assembly benchmarking pipeline due to the dependencies associated with two key bioinformatic tools use in the pipeline...

using snakedeploy with repos not on github

24

* snakedeploy version: 0.3.0 * Python version: 3.10.1 * Operating System: Debian GNU/Linux 9 ### Description Would like to use snakedelopy with either a local git repository or an internal...

archive cli docs inconsistent with code

2

**Snakemake version** 8.11.3 **Describe the bug** snakemake --archive filename.tar.gz, returns error ``` WorkflowError: Unsupported archive format (supported: .tar, .tar.gz, .tar.bz2, .tar.xz) ``` **Additional context** From the codebase it looks like...