Michael Sierk

Can you make tables with ensembl versions (on genes & transcripts)?

Load cram files locally

2

There are functions to add bam files locally or via HTTP, but only via HTTP for cram files. The local bam function uses readGAlignments, which does not read cram files....

syntax error

2

I'm getting the following error when running vembrane. ``` File "/opt/anaconda3/envs/Runx/lib/python3.10/site-packages/vembrane/common.py", line 244 type Primitive = str | int | float | bool | None ^^^^^^^^^ SyntaxError: invalid syntax ```...

**Describe the bug** AttributeError: type object 'TranslationTable' has no attribute 'vertebrate_mitochondrial' **To Reproduce** Steps to reproduce the behavior: Run the example code from the [documentation](https://hgvs.readthedocs.io/en/stable/examples/manuscript-example.html#infer-protein-changes-for-these-transcript-variants). ``` import hgvs import hgvs.parser...