Michael Schmid
Michael Schmid
@daattali can you tell me where I have to modify your code in order to show the y-axis for histogram marginal plots?
@crew102 Thanks so much! I tried, but couldn't figure it out. So I might have to use another package for marginal plots or just leave it as it is. Thanks...
You can provide argument `-w`. Then only the best query hit will be counted for a read. In the output you can then check column `median-multiplicity` which is a rough...
I made the move to Python3 a bit more generic by changing code in function `unicode_name` I think this should remove non ascii characters from from the unicode string while...
Do you have to open the gff file in byte mode? Do you in general have to open the files in binary mode?
> It is more appropriate to change the kmer length in the database build for nanopore reads. With Kraken1, we used a kmer length of 28 I believe. I have...
> Hi @zmunro, Alex Dilthey has some data about this in his metamaps paper. Check it out [here](https://github.com/DiltheyLab/MetaMaps) Where do we find suggestions for parameters?
OK, thanks! Will give this a try! EDIT: However, the manual says: "Additionally, the minimizer length `l` must be no more than the `k`-mer length." This is not satisfied if...