molinfzl

my command is : ./juicer.sh -z ./ga.fasta -p ./ga.length -y ./ga_MboI.txt -d /home/ga -D /home/software/juicer -g ga -s MboI -t 40 My question is that when I download data from...

Input file preparation

4

I would like to know how each input file was obtained, and whether I can also use hg38 as a reference genome to apply to other projects. My current understanding...

Speed up task processing

4

Hi,I'm hoping you could provide some guidance or suggestions. my command: ./make_chains.py hg38 Ea /data/groups/home/make_lastz_chains/genome/hg38.2bit /data/groups/home/make_lastz_chains/genome/Ea.2bit --pd /data/groups/public/home/Chains/Ea -f --chaining_memory 16 I use --executor local instead of --executor slurm, is...

parameters selection

1

Hi,I have been doing the alignment between human and mole recently, but I am confused by the many parameter choices. I have observed that you provided the alignment parameters between...