Marcus D. R. Klarqvist

Results 13 comments of Marcus D. R. Klarqvist

Although the function interface is `f(const uint8_t* data, size_t size)` you are free to pass any primitive type as input by casting. For example, for 64-bit values you can call...

Importantly, this is true for all subroutines in this library with the exception of the pospopcnt family of operations which are limited to 16-bit input words.

Hello @nemequ. Thanks for this! I'll address most of this. > It looks like you know this already, but CLANG_PREREQ is dangerous. https://sourceforge.net/p/predef/wiki/Compilers/#clang has an overview of the problem. I...

Thanks @WojciechMula . I'll investigate.

Thanks for reporting this @peterdfields . The problem appears to an assertion I've place in the computation of Hardy-Weinberg equilibrium. For some reason the offending line has an allele that...

@peterdfields I'll update the error message to reflect the offending variant line number and offending allele encoding. This is something I should've done in the first place.

@peterdfields A crude way would be like a manual binary search: 1. Input first half of file and check (easiest way is to pipe the data in from bcftools |...

@peterdfields Thanks for helping me getting to the bottom of this. Very helpful! I am investigating this.

Hello @peterdfields . Sorry for the delay in resolving this. I returned today from a trip abroad. Will pick up were I left of. Thanks for your patience!

Thanks for these suggestions @explodecomputer . These features are not yet implemented in Tomahawk. There is a big update coming to Tomahawk in the next few weeks and I will...