Mike Blazanin

Using an email address in the BugReports field

1

Feature/enhancement request: I'd like to use an email address for the BugReports field and have pkgdown create a "Report a bug" link in the sidebar of the page that actually...

Subject becomes garbled when it contains accented character and more than 55 characters

2

Weird bug here. If I send an email with a subject line containing an accented character, it works fine as long as the subject is 55 characters long or less:...

- [x] Start a new R session - [x] Install the latest version of caret: `update.packages(oldPkgs="caret", ask=FALSE)` - [x] [Write a minimal reproducible example](http://stackoverflow.com/a/5963610) - [x] **Do not** use parallel...

Since calc_deriv uses linear fitting of the raw data points to calculate the derivative, we can create a train function that picks the derivative window width based on cross-validation of...

Add parallel calculation backend

4

Many compute-intensive steps could be massively accelerated by parallelizing the backend calculation (e.g. many of the smoothing algorithms, calc_deriv) Should probably benchmark all the steps to determine which ones would...

E.g. I have multiple files, each containing pasted designs. After the designs have been merged as rows, I now want to separate_tidy the designs column

Add information on experimental setup best practices as vignette

2

Things like media blanks, proper blocking, timestep lengths, duration of run (e.g. for carrying capacity), evaporation, condensation issues, shaking, etc

Add regularization smoother

1

Also called a whittaker smoother, implemented in pracma::whittaker See: Eilers, Paul HC. "A perfect smoother." Analytical chemistry 75.14 (2003): 3631-3636. Stickel, Jonathan J. "Data smoothing and numerical differentiation by a...

As described in Zulkower, Valentin, et al. "Robust reconstruction of gene expression profiles from reporter gene data using linear inversion." Bioinformatics 31.12 (2015): i71-i79., there is a way to calculate...