mgavish

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Instruction on using the repo for inference is in the README under the NER section: https://github.com/dmis-lab/biobert#user-content-named-entity-recognition-ner:~:text=You%20can%20change%20the%20arguments%20as,using%20%2D%2Ddo_train%3Dfalse%20%2D%2Ddo_predict%3Dtrue%20for%20evaluating%20test.tsv. The bigger challenge is completing inference without using the repo, ie, repo specific functions...

Have you guys made progress? I'm also attempting to use BioBERT and Hugging Face for inference mode, i.e., my corpus is unlabeled. I figure I must use the labels that...