Matilda Åslin
Matilda Åslin
# nf-core/tools feature request I'd like a parameter that would change unexpected **warnings** to **errors**. This to avoid that misspelled parameter names are used and leaves silent errors. See discussion...
### Description of feature It would be very nice if methylseq had a metro map, so that is easier to get an overview of the pipeline.
### Description of feature Hi! We have an application to check if our sequencing runs fulfill certain (customisable) QC criteria after demultiplexing: https://github.com/Molmed/checkQC. We are considering using the `demultiplex` pipeline...
Hi! I'm having issues using the `bioconda-utils`: I installed mamba with https://github.com/conda-forge/miniforge#mambaforge and then ran: ``` mamba create -n bioconda -c conda-forge -c bioconda bioconda-utils mamba activate bioconda ``` However,...
Adding new module checkQC. Related to issue: https://github.com/nf-core/modules/issues/4011 Depends on https://github.com/nf-core/test-datasets/pull/1024 for tests to work. Note: The CheckQC version used in the module is not the latest. I was forced...
Unit tests should be run for multiple python versions (or at least the latest stable minor version). With this implemented we probably would have detected #98 sooner.
I encountered a case where CheckQC couldn't tell the whole story behind incorrectly specified indexes: Index in sample sheet: ``` ACATAGCG+CTAGCTTG ``` Index found in undetermined indexes: ``` CAAGCTAG+ACATAGCG ```...
Build of docs is currently failing (and has been for quite a while). It is because we need to attach a secret to the webhook and we have not gotten...