Martin Raden
Martin Raden
### This is a - [ ] Breaking change - [x] New feature - [ ] Bugfix ### I have - [x] Merged in the latest upstream changes - [x]...
the reported output alignment shows seq1 in the second row and seq2 in the first, which is kind of counterintuitive..
since I just again ran into the problem of updating a blacklisted recipe without noticing so (https://github.com/bioconda/bioconda-recipes/issues/18270) I would like to bring up again the discussion whether this could be...
for long target lists and `--out=FILE` IntaRNA crashes with "file handles exceeded" error in MS WSL
no subopt outputs, only for decomposed regions...
- read input data from CSV file - interprete column names as respective arguments and set arguments accordingly - call intarna for each line - append output
- input = seqs, rri, maybe intra-mol structure - create JS-based plotting routine (eg extending FORNA) - run JS-interpreter to produce SVG
seems there is a coredump when requesting `Etotal` CSV output when (target) SHAPE data is provided with `--tShape` (reported by and thanks to Sabine Reisser)
Following the results and repeating the benchmark from https://doi.org/10.1093/bib/bby032 we want to test whether a combination of a fast pre-filter tool like guugle will improve IntaRNAs runtime and prediction accuracy....