Marco Dalla Vecchia

Blur Animation source code and simplified output

1

Hello everyone! I've seen from [this issue](https://github.com/datacarpentry/image-processing/issues/28), that we were looking to implement a better blur animation figure for section 06-blurring. I've implemented a Python script that creates this animation...

[BUG] Spike in memory usage end of cellfinder inference phase

13

**Describe the bug** At the end of cellfinder cell splitting phase, RAM usage spikes until it takes all my laptop RAM (at least 8Gb which is available) and the process...

Pill counting as an alternative capstone challenge

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### How could the content be improved? Hello everyone, This issue is just an idea and possible improvement or alternative to the Capstone Challenge. I recently ran into **pill counting...

Explicitly set dark mode images to avoid varnish image color inversion

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As explained in #349, varnish defaults to inverting all images included in the curriculum for dark mode. This is a problem as most of the material included here relies on...

Add further reading section

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This draft PR partially addresses #347, #303 and #144. _Please briefly summarise the changes made in the pull request, and the reason(s) for making these changes._ This PR creates a...

[BUG] Folder of 2D TIFs downsamples much slower than 3D TIF from Napari brainreg

8

**Describe the bug** For the same data (no matter the size), registering with `brainreg` through Napari, a folder of 2D TIFs takes much longer (since they are loaded lazily) than...