Malachi Griffith

Results 36 comments of Malachi Griffith

Thanks @goodb for making that publicly available and linking it here. Very helpful to be able to refer to discussions like this thread, that letter, and this [OpenData StackExchange thread](http://opendata.stackexchange.com/questions/26/benefits-of-using-cc0-over-cc-by-for-data)....

I do think this is worthy of further discussion. It would be a bit surprising if negative results are not included in any of the other resources. Consider the following...

On the topic of CURIE. Here are the two registered so far: https://registry.identifiers.org/registry/civic.aid https://registry.identifiers.org/registry/civic.eid Also want to cross link this issue with these related development issues: https://github.com/griffithlab/civic-client/issues/1353 https://github.com/griffithlab/civic-client/issues/1358

Submitted request for `civic.gid`

I also submitted the request for `civic.vid` Currently it doesn't seem like I can request for disease or therapy/drug, because identifiers.org requires a working example URL for each entity. But...

Update on this: assertion -> civic.aid -> https://registry.identifiers.org/registry/civic.aid evidence -> civic.eid -> https://registry.identifiers.org/registry/civic.eid gene -> civic.gid -> https://registry.identifiers.org/registry/civic.gid variant -> civic.vid -> https://registry.identifiers.org/registry/civic.vid disease -> civic.did -> request submitted and...

Somehow I think the requests for did, tid and sid did not go through. Will have to reattempt.

Okay we now have requests submitted for did, tid, and sid. And this time I got confirmation emails. Still to be done. We will also need to request one for...

Note this issue documenting our registering of specific CURIEs: https://github.com/griffithlab/civic-client/issues/1631

How about for the 3rd column we say something like this: W clinical assertions and X evidence items for Y variants curated from Z published sources.