Vlad Makarov

Hello, I am trying to reproduce the spectrotype plot as per https://immunarch.com/reference/spectratype.html using the test_data i downloaded. It works as posted sp vis(spectratype(immdata$data, .col = "aa+v")) Error: !has_class(.data, "list") is...

Good afternoon In the Tracking clonotypes with specific nucleotide or amino acid sequences section https://immunarch.com/articles/web_only/v8_tracking.html the sequences are appearing at the plot listed alphabetically, not in the order listed. How...

How to specify groups order?

2

Hello, Any plot I make where I need to compare samples by group, the groups are always listed alphabetically. Is it a way to position them in specified order? Example...

Calling CNA from Cat genome; custom

3

Hello I am trying to call CNA from Cat (Genome assembly: Felis_catus_9.0 (GCA_000181335.4)) I see that for all species except human and mouse, we need to provide GCcontent file. I...

I am using FusionCatcher downloaded and installed via miniforge3 according to the manual at https://github.com/ndaniel/fusioncatcher/blob/master/doc/manual.md All seems to be working fine, thank you, but the output file misses two last...