Midori Harris
Midori Harris
FYPO has a great many processual phenotypes, including some in which the occurrence of a process is decreased, and others where a process that normally occurs isn't observed at all....
For work we're doing on FYPO, @matentzn and I have a question about CL:0000334 ! vegetative cell (sensu Fungi): Is it, or should it be, defined as a fungal cell...
From PMID:12840005 it looks like these synonyms ``` synonym: "RTS1 barrier" EXACT [] synonym: "RTS1 element" EXACT [] ``` should go with SO:0002021 mating_type_region_replication_fork_barrier, not SO:0001914 rDNA_replication_fork_barrier. Seems like it...
Can SO add a term to group nucleic acid (DNA or RNA) sequence regions, much as polypeptide features are classified under SO:0000839 polypeptide_region? e.g. name: nucleic_acid_region def: A biological sequence...
We have a lot of phenotypes in FYPO that describe something physical (cell or cellular component morphology, level of chemical, etc.) and specify when the phenotype is observed. Usually the...
We've noticed this the last few times we've committed the PomBase GAF to GO: the gene_association.pombase.inf.gaf file produced by the Jenkins job has far fewer inferred annotations than the equivalent...
Hi all, I've just been alerted to the existence of GO_REF:0000111. It looks rather useful to us, but has a few little problems Things I can fix: - the 'abstract'...