Maren Philipps
No, so far only the petab objective.
Oscillations of algal cell quota: Considering two-stage phosphate uptake kinetics https://doi.org/10.1016/j.jtbi.2024.111739
Spatiotemporal orchestration of Ca2+-cAMP oscillations on AKAP/AC nanodomains is governed by an incoherent feedforward loop https://doi.org/10.1101/2024.01.29.577875
This looks interesting but the model is defined in R: Model integration of circadian- and sleep-wake-driven contributions to rhythmic gene expression reveals distinct regulatory principles https://doi.org/10.1016/j.cels.2024.06.005
@C-Peiter Is this already implemented as Laske and can be closed?
The PESTO example only uses one trajectory as measurement data. Is this also the aim of this issue?
I finished it and also did optimization again, ended up with a different optimum than the one from the matlab BenchmarkCollection but the fit is slightly better for two and...
Could you briefly describe the changes you made to the original parameters file? I see that some fixed parameters are now missing.
I can see the advantages and I think that it is a viable solution that should be explored further. In general the long format for the condition table means that...
> Brief update from some further discussions with @dilpath: ... I support the renaming. On the pre-equilibration issue: I'm generally in favour of one explicit way of formulating this. Would...