Luke Tudge

misleading error message in geom_dotplot

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When the `y` aesthetic is mapped inappropriately for `geom_dotplot()` the error message states that the required `y` aesthetic is missing. At least from the point of view of the user's...

Docs: incorrect return type for eval_model()

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The docs [here](https://simpletransformers.ai/docs/classification-models/#evaluating-a-classification-model) give the return type of `model_outputs` from `eval_model()` as *list*, but it is *numpy.ndarray*, with number of rows equal to the number of evaluated samples and number...

Suggested python 3.10 support fixes for #1426 . I have tested the fixes (using `pytest tests`) with Python **3.8.10** and **3.10.5** BUT I had to disable the `longformer-allenai/longformer-base-4096` tests because...

support for python 3.10

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**Describe the bug** Python 3.10 is not currently supported. The removal of some abstract base classes from `collections` [in 3.10](https://docs.python.org/3/whatsnew/3.10.html#removed) is the only breaking change I have found so far...

validate_config_values attempts to append to tuple

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### Describe the problem The config value `nb_custom_formats` can be a string, as documented [here](https://myst-nb.readthedocs.io/en/latest/examples/custom-formats.html#custom-notebook-formats). If it is, then `validate_config_values()` converts it to a tuple [here](https://github.com/executablebooks/MyST-NB/blob/c98d4322503e58f947eeea478e005785b178b7f0/myst_nb/__init__.py#L215), presumably in order to...

wandb.finish not called

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The code for model training calls `wandb.init` to initiate a wandb run, but it does not call `wandb.finish` to signal that the run has ended. The wandb package does this...

reproducibility: argument manual_seed improperly interpreted

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Setting the `manual_seed` model argument to `0` (probably a fairly common choice) results in the argument being ignored instead of passed on to where it is needed. This bug occurs...

reproducibility: manual_seed not set in train_model()

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Somewhat related to #1477 but is a separate issue. The model argument `manual_seed` is handled during initialization of a model, but not when later also passed to the `train_model()` method....

changing the root entry in _toc.yml has no effect at build

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### Describe the problem Whereas most changes to `_toc.yml` (new pages, etc.) will be taken into account on a new build, changing the `root` entry will only take effect if...