german nudelman

same here. Strangling with linking the htslib so. Do you mind sharing the binaries that'd run on Ubuntu 16? thanks, German

dear author, thanks for sharing this useful utility. I noticed that for some shallow BAM files, your utility generate the following error: NGSCheckMate/ncm.py", line 220, in createDataSetFromDir real_depth[file] = depth[file]...

thanks Andre, indeed moving from 0- to 1-based levels help. It's just that on the other thread you seem to have suggested that the level were 0-based, therefore, thanks for...

thanks Andre 1. call event types independently via --event-types and run in parallel - we had it implemented already as part of our snakemake pipeline 2. skip overly complex genes...