Kevin Lord
Kevin Lord
Sure, may be a bit as I'll have to run it again. I didn't notice much of interest that looked any different than the rest of the run.
Hi Dan, Here is the log file. By this point there was no CPU activity and it appeared to have just deadlocked again. [stdout.log](https://github.com/luntergroup/octopus/files/7093056/stdout.log)
Ah, sorry I totally missed that - was looking at the bottom of the log. I just emailed you a GDrive link to the BAMs and further explanation.
Hmm, interesting. The normal sample is the NA12892 platinum genome and it was mapped using BWA-MEM. The only thing a bit out of the norm that I can think of...
I still hit this pretty regularly in my daily work. Any eta?