Lucas Mitsuo Taniguti

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icon company @mendelics icon location Piracicaba icon location Bioinformatics Engineer

Results 3 issues of Lucas Mitsuo Taniguti

Delocalization not working when using Structs as outputs

6 comment

I could not find on [WDL spec](https://github.com/openwdl/wdl/blob/main/versions/1.0/SPEC.md) something saying that structs could not be used as outputs... so I decide to report here. This is an example I prepared: ```wdl...

Setup for flask - unexpected behavior probably due to session management

#### The problem I'm trying to use _flask, flask-sqlalchemy, factory-boy,_ and _pytest,_ but I'm having some kind of trouble with sessions (I think). Could anyone help me? I've prepared a...

WDL Task fails with Google Batch backend due to gcloud (RunWhamgOnCram)

2 comment

Hi team, I'm running the `GATKSVPipelineSingleSample` workflow using **Cromwell with the Google Batch backend**, and one of the tasks — specifically `RunWhamgOnCram` — fails due to an issue with how...

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