ljwoods2
ljwoods2
@IAlibay Done, I reverted a few things line-wise so I may have undone some PEP8 changes as well. In the future, should I change all the files I touch to...
@hmacdope Yes, Oliver mentioned this issue: https://github.com/MDAnalysis/mdanalysis/issues/2884. I can come up with a better solution which in general allows object-based trajectory formats being passed in to not be caught by...
Maybe it's as simple as iterating through all _format_hint() methods except for chainreader before checking chainreader
Closing this because zarrtraj accepts filename strings instead of zarr.Group objects now, so no change to format_hint is needed
My apologies, I forgot to turn off my autoformatter
Yes, I'm working on this for my GSOC project! The approach right now is to make H5MD file streamable from cloud services by first reformatting the metadata of the h5...
> Can this issue be addressed independently from #4827 ? Fixing this relies on being able to check if a reader inherits from `StreamReaderBase` (and failing if a stream reader...
@yuxuanzhuang Thank you for the in-depth look! Overall, I agree with you that we could adapt the reader to be more compatible. As for the initialization of results, my thinking...
Oh thank you, didn't know that existed, that would be a far better comparison
@RobertArbon Cool to see other people are interested in this, and thanks for reaching out. Why did you decide to go with dask dataframes instead of dask arrays? MDAnalysis analysis...