Ati

reverse branch in my ggtree

1

I have a MSA file and wanted to create tree from it. I created the distance matrix first then created a ggtree for that. Now it works. My issue is...

I used the gtf2bed tool to convert the gtf file to 12-column bed file. The score is all 0. I was wondering if it's correct or not? Thanks, Lida

error in function runPairedSampleAnalysis()

1

Hello, I have tried the copyCat and function runPairedSampleAnalysis() for CNV analysis but got below error. [1] "inferred bin size: 10000" [1] "Can't infer read length from window file headers"...

Hi there, Could you explain what is the **TR_95_T.cn{s,r}** in scatter plot? how I can generate it?