loic borcard
loic borcard
Ok thanks @Daniel-VM , I am now working on adding Flye, it's my first time contributing to nf-core, I was looking for guidance as waht is necessary to do.
> Awesome @lborcard. We have other interesting approaches in mind re: #57 . For example, improving assembled genomes by adding a genome rotation step. We proposed here [cyclator ](https://github.com/sanger-pathogens/circlator) or...
So dnaapler/cyclator would take the output of Dragonflye? is there a module for either of these tools?
I can work on a dnaapler module if that would help?
i added it to the list
from which original format you would like to implement that?
thank your answer, yes I can give you an example file. here is an example: https://s3.amazonaws.com/nanopore-human-wgs/bulkfile/GXB02001_20230509_1250_FAW79338_X3_sequencing_run_NA12878_B1_19382aa5_ef4362cd.fast5 I will try to split and see if I run into the same error....
I am pretty sure that the python split.py does not work with the `-n ` flag because it does work without any flags
> @lborcard The split works for me. Can you provide details on your machine? OS ? Sorry for the late reply, I am working on centos 8
I tested again today after updating to 3.84 and I get the same error message