Louis Bergelson

Results 240 comments of Louis Bergelson

It seems like someone has uploaded the jpgs to a different project as well. You can get what I believe are the same files from `nikitarom/planets-dataset` using: ``` !kaggle datasets...

This issue confused a whole group of us who are doing the class together, it would be good to update the notebook with some notes about a workaround.

@jkbonfield It's super confusing... the namespace is `samjdk` and they're all lowercase. (ex: ``` -Dsamjdk.use_async_io_read_samtools=true ``` I don't know why, it's a historical artifact and one that really needs documentation...

@clintval Yeah, we're definitely going to get to it. Reviews have been really slow lately because working from home in the pandemic is killing my productivity.

@magicDGS Sorry I haven't gotten back to you on this. I think we're very interested in this but I haven't had time to take a proper look. It's a big...

I think @pshapiro4broad would be a good maintainer.

While we're on the topic, @cmnbroad has been the defacto maintainer of the cram code for the past several years. It would make sense to make him a maintainer as...

@d-cameron Thank you for this PR. It sounds like a big speedup for bam reading. It's fairly complicated multithreaded code in a mission critical section of the codebase so it...

@d-cameron Thank you! That's great. We will review this this week.

@d-cameron I'm sorry I haven't gotten through reviewing this yet. I expected to get an htsjdk release out this week and then review it after that, but I've run into...