Liam Beckman
Liam Beckman
## Overview Preparing for the 0.11.0 release! > https://github.com/ohsu-comp-bio/funnel/releases/tag/0.11.0-rc.4 See the following PR's for discussions and pointers for this release: > - https://github.com/ohsu-comp-bio/funnel/pull/718 > - https://github.com/ohsu-comp-bio/funnel/pull/716
## Overview **General Use Case:** user launches funnel and then launches another process to issue the jobs, all while using named sockets to handle communication between the funnel server and...
# Overview Adding [Snakemake](https://snakemake.github.io/) tests to Funnel would allow for increased interoperability with existing workflows. Ideally the tests would be automated and be able to run in Github Actions à...
## Background Currently the [Kubernetes support in Funnel](https://ohsu-comp-bio.github.io/funnel/docs/compute/kubernetes/) is built around Docker-in-Docker (dind) as opposed to the native Kubernetes executor. This adds another layer of networking and resources that could...
## Overview Add support for users to be able to pass in their desired container engine to the Funnel workers. ## Related Github Issues - Addresses #962 ## Additional Resources...
- Updates 'unsupported backends' response code (Error code 400 instead of 500) - TES Compliance Test: https://github.com/elixir-cloud-aai/openapi-test-runner/blob/dev/tests/create_task_backend_parameters_negative.yml#L32-L35 - Updates Nextflow workflow to use correct branch (`master` instead of `tes-update-1.1`)
# Overview This release adds support for: - Configurable Container engines - Task tag propagation to containers - Native K8s Executor
# Overview This PR includes updated support for task tag propagation to containers!
# Overview Currently there is no visualizer for the workflows submitted in Funnel. It could be beneficial to add a way to allow users to track: - The history of...
# ⚙️ Overview > Adapted from [*RPC-based plugins in Go*](https://eli.thegreenplace.net/2023/rpc-based-plugins-in-go) by [Eli Bendersky](https://eli.thegreenplace.net/) and [go-plugin examples](https://github.com/hashicorp/go-plugin/tree/main/examples/basic) 🚀 This PR adds initial support for Plugins using the [`go-plugin`](https://github.com/hashicorp/go-plugin) package from [HashiCorp](https://github.com/hashicorp)....