Laura Luebbert, Ph.D.
Laura Luebbert, Ph.D.
Hi Vinayak, thanks for reaching out. gget currently matches the standard settings for megablast (on by default). It looks like the settings from the web you posted below are the...
Hi Abe, this is great work, thank you! I'm pretty busy right now but I'll try to start merging asap. I just have two thoughts at the moment: 1. We'll...
Oops sorry didn't mean to close this
No need, I'll reopen this one as soon as the unit tests are passing and I can make a new dev branch
I did it again lol sorry
Nomadscores [genename.org](http://genename.org/) GWAS [UCSC in-silico PCR](https://genome.ucsc.edu/cgi-bin/hgPcr) Now part of gget opentargets (see comment below): GTEx [String](https://string-db.org/) Chembl
https://github.com/pachterlab/gget_examples/issues/2
Some databases (GTEx, String, ChEMBL) can be accessed through [gget opentargets](https://pachterlab.github.io/gget/en/opentargets.html) added in gget version >= 0.29.0
Note: Some DepMap data will be accesible through [gget opentargets](https://pachterlab.github.io/gget/en/opentargets.html) in gget version >= 0.29.0
Just linking the original issue here for reference https://github.com/pachterlab/gget_examples/issues/6