lamthuy

Problem when loading amr with snt having new line \x85 character

3

Hi, I used function load_and_serialize in penman_serializer to load amr 2.0. It failed to load and serialise because in the snt there is a character \x85 which might e a...

The current implementation of the adafactor is consistent with the paper's default hyperparameters choice. In particular, in the get_lr function at https://github.com/jettify/pytorch-optimizer/blob/19c3e41952b94f2d60db06e559ee9a1433b25e53/torch_optimizer/adafactor.py#L85 We can see that if relative_step is True,...

[ENH] wavefunction at coordinates

1

Hi, Is there a way to get the value of the wavefunctions at input coordinates? Thank you!

Bugs in ancestral output order

1

There is a small bug where the order of the branches: - in the ancestral output branch 0,1,2 https://github.com/rambaut/Seq-Gen/blob/e8660d73769297d25a88b40d5b828a6fce7784b5/source/evolve.c#L569 - while in the WriteTree the order was 1,2,0 https://github.com/rambaut/Seq-Gen/blob/e8660d73769297d25a88b40d5b828a6fce7784b5/source/treefile.c#L567 This...

How to calculate the MAE of the submitted files

3

Hi, I am new to this benchmark. I am trying to figure out the correct way to calculate the MAE of my prediction. I am not sure the following steps...

I came accross this paper https://arxiv.org/abs/2406.06316 which used more than 700 datasets from TDC. I checked in the current github so far there isn't that many datasets as stated in...