Konrad Rokicki

Results 15 issues of Konrad Rokicki

When the git repo is configured with SSH (i.e. the remote starts with "[email protected]:krokicki/myproject.git") then binary packing fails as follows (gitfs.New fails the same way): ``` $ gitfs ./... panic:...

enhancement

I tried to create a new compute environment with FSx, which I had done successfully in the past with Tower. After a while in CREATING mode, it entered ERRORED mode...

It would be useful if all resources created by Batch Forge (especially EC2 instances and FSx volumes) were tagged based on some custom key/value inputs in the Tower UI. Our...

### Description of feature Currently local modules have a single file structure e.g. local/.nf. It would be nice if the structure mirrored the nf-core module structure e.g. local///main.nf and meta.yml....

enhancement

**Platform** - Operating system and version? macOS Catalina - Shell and version? GNU bash, version 3.2.57(1)-release (x86_64-apple-darwin19) - autoenv installation method: automated (with cURL), it used Brew - autoenv version:...

type/bug

After loading an OBJ file it renders nicely, but when I try any of the filters, nothing happens. In particular I want to use some of the sampling filters, such...

## Bug report ## Description of the problem When no spots are detected, Takashi says that the pipeline throws an error. He had to create empty result files to handle...

bug

Currently, only demo_tiny uses RS-FISH. It should be the default for all the demo data sets.

enhancement

If MVL file is missing, it may be possible to create one from the CZI metadata (for the latest CZI formats).

enhancement

Integrate BigStream2 to replace BigStream1 for registration. Compare results and performance.

enhancement