knutj

Invalid MEX-file '/home/knutjb/meshmonks/meshmonk/matlab/compute_correspondences.mexa64': /usr/local/lib64/libmeshmonk.so: undefined symbol: _ZTIN8OpenMesh12BasePropertyE

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I have compiled the mex files and libmeshmonk.so. When I run a demo I get this error. Invalid MEX-file '/home/knutjb/meshmonks/meshmonk/matlab/compute_correspondences.mexa64': /usr/local/lib64/libmeshmonk.so: undefined symbol: _ZTIN8OpenMesh12BasePropertyE Error in test_compute_correspondences (line 38) compute_correspondences(floatingFeatures,...

Matlab 2019b when running the BatchProcessingWithMeshmonk.m with own obj face I get this error. K>> [usemtl,mtl,maps] = parseMTL(filename,usePrefix); Unrecognized function or variable 'parseMTL'. The obj file is called 007.obj and...

display p-values overlay

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**Describe the feature you are missing** A clear and concise description of the feature. Should include information on the expected inputs and output. FSbrain should be able to load p-value...

error in Box-Cox transformation

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When I use Box-Cox transformation I get this error. Traceback (most recent call last): File "/home/knutjb/pymediator/bin/tm_tools", line 164, in args.func(args) File "/home/knutjb/pymediator/lib64/python3.7/site-packages/tfce_mediation/tools/boxcox_transformation.py", line 65, in run affine_mask = img_surf.get_affine() File...

When I run step 5 I get this error message all the input array dimensions for the concatenation axis must match exactly, but along dimension 0, the array at index...

I use a long term version of Ubuntu and have started matlab with these options. LD_PRELOAD=/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.30:/usr/local/lib/libmeshmonk.so:/usr/local/lib/libOpenMeshCore.so:/usr/local/lib/libOpenMeshTools.so matlab I have gcc 11. How can I solve this problem?

* **What are you trying to do?** What is the q limit for fdr. Is it 5 %? * **If you've tried running this with BrainSpace code already, how did...

no parcellation for GLM with Freesurfer.

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* **What are you trying to do?** I am trying to run GLM on Freesurfer mgh and get out parcellation for each p-values after FDR * **If you've tried running...

I am using the latest version of pysurfer with python 3.10. The system is Fedora 37 with wayland and nvidia gbm. QSocketNotifier: Can only be used with threads started with...

I have followed your tutorial, but it did not include instructions on how to create chromosome-separated BED files. Could you please add that information? Thank you!