Kam Dahlquist
Kam Dahlquist
Thank you for creating this contributor covenant. I have just adopted it for all my projects. On your website, you note that "The Contributor Covenant is released under an MIT...
We are going to start using GRNsight in BIOL 367 this week. I was writing the protocol and had occasion to look up "ERT1" in the "Load from database" GRN....
I'm opening this issue so that you can post a comment here when the GRNsight beta server is refreshed, so that @kdahlquist (and others) will get an e-mail notification.
Do this in beta 7.0.8: - load a GRN from the database - uncheck node coloring - recheck nod coloring--the checkbox gets checked and the node coloring comes back in...
Do this: - upload an unweighted GRN from a file with no expression data - nodes are colored gray instead of white Need to check to see if this also...
Do this on either production or beta 7.0.8: - Load Demo number 2 - From the View menu, select small - select medium - select large - select fit to...
It's becoming time to update the network backend database from Intermine/SGD. Note that the previous versions were updated in 3/08/2022 and 3/07/2023, so targeting the beginning of March 2024 would...
When exporting to Excel, the option to export the "network_weights" sheet should be available at all times. The "network_optimized_weights" sheet should only be available if there is edge weight data,...
When exporting to Excel, the default value for alpha on the optimization_parameters sheet should be 0.02, not 0.002.
There is a test case that needs to be done with regard to .sif files. If a user creates an unweighted .sif file with a mix of "pd" and "pp"...