Karanbir Brar

Mutsig crashes with error "matrix dimensions must agree"

3

Hi, I'm using MutSig2CV on a Linux platform using the 64-bit executable with MATLAB 2013a runtime installed. I've attached the output of the tool below; it crashes with error "matrix...

Running tool with custom CNV calls

5

Hi, I'm having issues trying to run SigProfiler for CNV data using custom CNV calls. We have an in-house pipeline for CNV calls that is similar to the ASCAT approach,...

selectedPathways argument in oncoplot not functioning properly with user-defined pathways

3

Hi, I'm having an issue with the "selectedPathways" argument in the oncoplot function, when using my own user-defined pathways. I either get the error below (with code): ``` oncoplot(maf =...