Kasper Daniel Hansen
Kasper Daniel Hansen
Return value when `index.return = TRUE` would be a list of 2 matrices.
Currently, `seqinfo` is empty. It should be populated based on the genome we use. Is there a way to store the annotation (ie. gencode) inside the object? Not sure how,...
From reading the web pages it was not immediately clear to me if any tools exists to convert to/from DAR. I am especially interested in conversion to/from markdown (some flavour),...
`gaps()` does not work on a GRangesList: ``` > gaps(grIntrons.24) Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘gaps’ for signature ‘"CompressedGRangesList"’ ```...
When I use findOverlaps with type="equal" and a GRangesList I get an error: ``` > findOverlaps(gr, grIntrons.24, type = "equal") Error in match.arg(type) : 'arg' should be one of “any”,...
I would like to get this function exported. If necessary, I'll be happy to make a pull request.
It used to be pretty "easy" to disable Windows and/or macOS builds by hand-editing the `.github/workflows/check-bioc.yml` file. I want to do this, because I am developing in a setting where...
It would be nice to have some short documentation on what to do when a new version of Bioconductor is released. For example, the `use_bioc_github_action()` function should probably be re-run.