juliabelk
juliabelk
For me, downgrading specifically ggplot fixed this. This worked for me: `conda install conda-forge::r-ggplot2=3.3`
@yojetsharma this sounds similar to an issue I ran into - #2199 may provide some guidance if it is in fact the same issue
One option is to use `addClusters(proj, method="scran", reducedDims = "LSI_Combined")` to get around the Seurat issues. However I had trouble tuning the number of clusters (equivalent to resolution in Seurat)...
For me, downgrading specifically ggplot fixed this. This worked for me: `conda install conda-forge::r-ggplot2=3.3`