Jeffrey Miller

icon indicating a website link http://Jeffrey.miller.github.io icon indicating an email [email protected]

icon company University of New Hampshire icon location Durham, NH icon location eDNA Research Scientist at University of New Hampshire Instructor for 'Genomics & Bioinformatics'

Results 3 issues of Jeffrey Miller

Fixed link to UCSC to correct file

1 comment

The previous link fetched the human chr10; the following tutorial errors out with the human file.

Update parse_taxonomy.R

1 comment

Added 'd' to gsub regular expression to remove 'd__' that is used in some formats instead of 'k__' (such as the mitofish reference)

taxa_barplot plots all taxa as remainder when a sample has 0 reads

Very low priority but easy update: if there are any failed samples (0 reads) for taxa_barplot, the normalization functions produce NaNs from dividing by zero. This results in all taxa...