Jon Puritz

icon indicating a website link marineevoeco.com icon indicating an email [email protected]

icon location Kingston, RI icon location Associate Professor at the University of Rhode Island

Results 6 issues of Jon Puritz

vcfwave add allele counts at sample level

It would be great to have sample level allele counts added to the output for `vcfwave`. This would allow for usage in `pooled-continuous` context.

enhancement
help wanted

Problem parsing new .loci format

I'm not sure if this fix is needed for other output formats, but this worked to fix issues I was seeing in VCF outputs.

Feature Request: multiple chromosomes

1 comment

It would be great to be able to look at data from multiple chromosome simultaneously. This would be especially great for RRL applications where *de novo* assemblies are not very...

[FEATURE REQUEST]

Inline barcode demultiplexing

Feature Request: Horizontal Plots

Would be great to have an option for horizontal based plots

Feature Request for # filter reads with unwanted indexes (to remove possible contamination)

Hi, Would it be possible to have options to filter by only the indices listed in the file, instead of a list of contaminated ones?