Jacob Pfeil

Thanks for making FastTreeShap! I'm excited to use it. I want to generate some classic SHAP plots. Can you provide an example, maybe in a jupyter notebook, of how to...

This is a more flexible way to check the sorting order of a BAM file.

Unable to download progeny mouse model

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**Describe the bug** Tried downloading the progeny mouse model but I get a TypeError: Nonetype is not iterable. Human works fine. **To Reproduce** ``` model = dc.get_progeny(organism='mouse', top=100) ``` ```...

Speed up Dino with DALI

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### Describe the question. Hello, I'm trying to speed up the image augmentations in DINO with DALI. I'm trying to start with a naive solution which is just calling the...

Running multi-gpu hangs after first step

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I'm using accelerate multi-gpu support to run on a cluster of A100 gpus. ``` ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------In which compute environment are you running? This machine ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Which type of machine are you using?...

Discriminator loss converges to zero early in training

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I compared v0.1.26 without the GAN and v0.1.36 with the GAN using the fashion mnist data and was able to get better reconstructions without the GAN: https://api.wandb.ai/links/pfeiljx/f7wdueh0 Do you have...

Feature Request: Horizontal and Vertical Lines

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Thank you so much for building this! Do you have any plans to add the ability to annotate the charts. Something as simple as horizontal and vertical lines would help...

Provide configuration to disable SSL verify

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Hello, I'm trying to use the mygene.info api, but I'm getting a CERTIFICATE_VERIFY_FAILED error: httpx.ConnectError: [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: self-signed certificate in certificate chain (_ssl.c:1133) I can use requests,...

Thank you for this awesome repo! I wanted to see if your implementation could speed up sampling within the optuna framework. The simple tests I did showed around a 40%...

Hello, It would be great if this library supported an x axis where the datetime could be highlighted similar to the y axis for price. The user could define the...