Jure Pečar

Results 11 comments of Jure Pečar

I "worked around" this by picking the latest version of the python package that dropped support for python 2.7, so the multi_deps thing went away entirely.

pkg-config returns whatever is specified in $EBROOTOPENCV/lib/pkgconfig/opencv.pc ... and that 3rdparty path is not specified there. Therefore linking with libippicv fails. I'm now removing -lippicv from opencv.pc ... as you...

Yep, that fixes it. What is now the official procedure to introduce this line to opencv easyconfig file? :)

If you have someone in or near Barcelona, I can highly recommend this event: https://hpckp.org This year there's a whole day dedicated to singularity and easybuild, two most common approaches...

Another feature of this `eessi-init` I would like to see is ability to do its job in non-interactive environment as well, for example in a container startup scenario where we...

[input.faa.gz](https://github.com/user-attachments/files/20279984/input.faa.gz) So far yes, we only hit this on beegfs. We also have another scenario hitting this error from foldseek but I don't know what version of MMseqs2 is embedded...

[output_fail.txt](https://github.com/user-attachments/files/20280509/output_fail.txt) This is stdout only, but stderr only has the title error.

Yes, 18.1.8 was the first one I tried but one of the dependencies complain that it's too new and this exact old one is needed.

> do you remember which one? IIRC the chain is numba - llvmlite - LLVM.

> I had to add this dependency to cooltools ` ('pyfaidx', '0.8.1.2'), ` Interesting ... it doesn't complain here. I do see "import pyfaidx" in cooler/util.py for example but I...